Comparison number of identified PSMs
FDR threshold
0.1 %
1 %
5 %
None
Version
start
adapted
scoring method
MSAmanda
MS²Rescore
Method
first
max 1 prec
max 2 prec
max 3 prec
max 4 prec
max 5 prec
all
second (ms2rescore)
merged (ms2rescore)